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Hotspot Regions of Quantitative Trait Loci and Candidate Genes for Ear-Related Traits in Maize: A Literature Review

文献类型： 外文期刊

作者： Zhang, Xingjie 1 ; Sun, Jiachen 2 ; Zhang, Yudong 3 ; Li, Jinfeng 1 ; Liu, Meichen 1 ; Li, Linzhuo 1 ; Li, Shaoxiong 1 ; Wang, Tingzhao 2 ; Shaw, Ranjan Kumar 3 ; Jiang, Fuyan 3 ; Fan, Xingming 3 ;

作者机构： 1.Yunnan Univ, Sch Agr, Kunming 650500, Peoples R China

2.Yunnan Agr Univ, Coll Agron & Biotechnol, Kunming 650201, Peoples R China

3.Yunnan Acad Agr Sci, Inst Food Crops, Kunming 650205, Peoples R China

关键词： maize; quantitative trait loci; ear-related traits; consistent QTL; candidate gene; hotspot region

期刊名称：GENES （ 影响因子：3.5； 五年影响因子：3.9 ）

ISSN：

年卷期： 2024 年 15 卷 1 期

页码：

收录情况： SCI

摘要： In this study, hotspot regions, QTL clusters, and candidate genes for eight ear-related traits of maize (ear length, ear diameter, kernel row number, kernel number per row, kernel length, kernel width, kernel thickness, and 100-kernel weight) were summarized and analyzed over the past three decades. This review aims to (1) comprehensively summarize and analyze previous studies on QTLs associated with these eight ear-related traits and identify hotspot bin regions located on maize chromosomes and key candidate genes associated with the ear-related traits and (2) compile major and stable QTLs and QTL clusters from various mapping populations and mapping methods and techniques providing valuable insights for fine mapping, gene cloning, and breeding for high-yield and high-quality maize. Previous research has demonstrated that QTLs for ear-related traits are distributed across all ten chromosomes in maize, and the phenotypic variation explained by a single QTL ranged from 0.40% to 36.76%. In total, 23 QTL hotspot bins for ear-related traits were identified across all ten chromosomes. The most prominent hotspot region is bin 4.08 on chromosome 4 with 15 QTLs related to eight ear-related traits. Additionally, this study identified 48 candidate genes associated with ear-related traits. Out of these, five have been cloned and validated, while twenty-eight candidate genes located in the QTL hotspots were defined by this study. This review offers a deeper understanding of the advancements in QTL mapping and the identification of key candidates associated with eight ear-related traits. These insights will undoubtedly assist maize breeders in formulating strategies to develop higher-yield maize varieties, contributing to global food security.

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