Characterization of the complete chloroplast genome of Yuanjiang wild Ichang papeda (Citrus cavaleriei) in China
文献类型： 外文期刊
作者： Zhang, Zi-hao 1 ; Long, Chun-rui 1 ; Jiang, Yan 3 ; Yang, Shi-zao 1 ; Zhao, Jun 1 ; Wang, Shao-Hua 1 ;
作者机构： 1.Yunnan Acad Agr Sci, Inst Trop & Subtrop Cash Crops, Baoshan, Yunnan, Peoples R China
2.Fujian Agr & Forestry Univ, Coll Hort, Fuzhou, Peoples R China
3.Inst Dehong Trop Agr Res Inst Yunnan, Ruili, Peoples R China
关键词： Citrus cavaleriei; wild Ichang papeda; chloroplast genome; phylogenetic analysis
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 3 期
页码：
收录情况： SCI
摘要： Ichang papeda (Citrus cavaleriei) is an endemic perennial plant in China. In this study, we assembled and annotated the complete chloroplast genome of Yuanjiang wild Ichang papeda using Illumina Hiseq-2500 sequencing data. The chloroplast genome is constituted of 160,996 bp, containing a 87,634 bp large single-copy region, a 18,762 bp small single-copy region, and a pair of 27,300 bp inverted repeat regions. The chloroplast genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNAs and 4 rRNAs. Phylogenetic analysis showed that the relationship between the chloroplast gennomes ofC. cavalerieiandC.reticulatais the closest, which consistently support their chloroplast relationships.
- 相关文献
作者其他论文 更多>>
-
Comparative physiochemical and transcriptomic analysis reveals the influences of cross-pollination on ovary and fruit development in pummelo (Citrus maxima)
作者：Wang, Shaohua;Long, Chunrui;Liu, Hongming;Pan, Li;Yang, Shizao;Zhao, Jun;Jiang, Yan;Bei, Xuejun
关键词：
-
Improvements in Sugarcane (Saccharum spp.) Varieties and Parent Traceability Analysis in Yunnan, China
作者：Zhao, Yong;Zan, Fenggang;Deng, Jun;Zhao, Peifang;Zhao, Jun;Wu, Caiwen;Liu, Jiayong;Zhang, Yuebin
关键词：sugarcane (Saccharum spp.); variety improvements; agronomic/industrial characteristics; disease incidence; parent traceability
-
New Method for Sugarcane (Saccharum spp.) Variety Resources Evaluation by Projection Pursuit Clustering Model
作者：Zhao, Yong;Zhang, Yuebin;Zhao, Jun;Zan, Fenggang;Zhao, Peifang;Deng, Jun;Wu, Caiwen;Liu, Jiayong
关键词：sugarcane variety; projection pursuit clustering; PPC; agronomic/industrial trait; projection direction; projection value
-
Genetic Improvement of Sugarcane (Saccharum spp.) Contributed to High Sucrose Content in China Based on an Analysis of Newly Developed Varieties
作者：Zhao, Yong;Liu, Jiayong;Zan, Fenggang;Zhao, Peifang;Zhao, Jun;Deng, Jun;Wu, Caiwen;Huang, Hairong
关键词：sugarcane (Saccharum spp.); variety; sucrose; technological characteristics; improvement generations
-
Transcriptome and Metabolome Comparison of Smooth and Rough Citrus limon L. Peels Grown on Same Trees and Harvested in Different Seasons
作者：Liu, Hong-Ming;Long, Chun-Rui;Wang, Shao-Hua;Fu, Xiao-Meng;Zhou, Xian-Yan;Mao, Jia-Mei;Yang, Hong-Xia;Du, Yu-Xia;Li, Jin-Xue;Yue, Jian-Qiang;Hu, Fa-Guang
关键词：autumn flowering fruit; transcriptome; metabolome; peel roughening; phytohormone signaling; cell division
-
Characterization of the complete chloroplast genome of 'Yunning No.1' lemon (Citrus limon)
作者：Wang, Shao-hua;Gao, Jun-yan;Liu, Hong-ming;Zhou, Xian-yan;Yue, Jian-qiang;Dong, Mei-chao;Yang, Fan;Zhou, Dong-guo;Guo, Li-na;Long, Chun-rui;Deng, Guang-zhou;Yuan, Xiao-hui
关键词：Lemon; Chloroplast genome; Phylogenetic analysis
-
Optimizing selection indices in sugarcane seedlings
作者：Yang, Kun;Wu, Cai Wen;Qing, Wei;Zhao, Jun;Yao, Li;Zhao, Liping;Zhao, Yong;Zhao, Peifang;Chen, Xuekuan;Liu, Jiayong;Li, Fu-qing;Jackson, Phillip Andrew;Wei, Xianming;Yang, Kun;Wu, Cai Wen;Qing, Wei;Zhao, Jun;Yao, Li;Zhao, Liping;Zhao, Yong;Zhao, Peifang;Chen, Xuekuan;Liu, Jiayong;Li, Fu-qing
关键词：
