Characterization of the complete chloroplast genome of Rosa chinensis 'Old Blush' (Rosaceae), an important cultivated Chinese rose
文献类型: 外文期刊
作者: Li, S. 1 ; Qu, X. 2 ; Zhong, M. 4 ; Jiang, X. 4 ; Dong, X. 4 ; Yi, T. 2 ; Tang, K. 3 ; Dai, S. 1 ; Hu, J-Y 4 ;
作者机构: 1.Beijing Forestry Univ, Coll Landscape Architecture, Beijing 100083, Peoples R China
2.Chinese Acad Sci, Plant Germplasm & Genom Ctr, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
3.Yunnan Acad Agr Sci, Natl Engn Res Ctr Ornamental Hort, Flower Res Inst, Yunnan Flower Breeding Key Lab, Kunming 650231, Yunnan, Peoples R China
4.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Grp Plant Mol Genet & Adaptat, Kunming 650201, Yunnan, Peoples R China
关键词: plastome; Rosaceae; phylogenomics
期刊名称:VII INTERNATIONAL SYMPOSIUM ON ROSE RESEARCH AND CULTIVATION
ISSN: 0567-7572
年卷期: 2019 年 1232 卷
页码:
收录情况: SCI
摘要: Rosa plants have become model species for woody and ornamental plants with great economical and biological importance. To develop genomic tools for understanding the biological traits evolution and domestication processes of roses, we here present the complete chloroplast genome of Rosa chinensis 'Old Blush' (OB). The total size of the plastome was 156,591 bp with GC content about 37.2%. It contained a large single copy region (LSC) of 85,737 bp and a small single copy region (SSC) of 18,766 bp separated by a pair of inverted repeats (IRs) of 26,044 bp. A total of 113 unique genes including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes were annotated. Phylogenomic analysis revealed that OB was closer to R. odorata than R. roxburghii. The newly sequenced plastome of OB will provide useful genetic resources for understanding the domestication history of modern roses.
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