Cloning and characterization of a novel avirulence gene (arp3) from Xanthomonas oryzae pv. oryzae
文献类型: 外文期刊
作者: Liang, B 1 ; Yu, TG 2 ; Guo, B 2 ; Yang, C 2 ; Dai, LY 2 ; Shen, DL 2 ;
作者机构: 1.Fudan Univ, Sch Life Sci, Inst Genet, State Key Lab Genet Engn, Shanghai 200433, Peoples R China
2.Fudan Univ, Sch Life Sci, Inst Genet, State Key Lab Genet Engn, Shanghai 200433, Peoples R China; Fudan Univ, Sch Life Sci, Inst Biodivers Sci, Minist Educ,Key Lab Biodivers Sci & Ecol Engn, Shanghai 200433, Peoples R China; Yunnan Acad Agr Sci, Inst Crop Genet Resources, Kunming 650205, Yunnan, Peoples R China
关键词: Xanthomonse oryzae pv. oryzae;Apr3(avrBs3-related protein 3);Avr Bs3 gene family;TRANSCRIPTIONAL ACTIVATION DOMAIN;III SECRETION;PLANT-CELL;C-TERMINUS;PROTEIN;BACTERIAL;AVRBS3;TRANSLOCATION;SIGNALS;YOPE
期刊名称:DNA SEQUENCE ( 影响因子:0.408; 五年影响因子:0.594 )
ISSN:
年卷期:
页码:
收录情况: SCI
摘要: A novel avirulence gene was cloned from Xanthomonas oryzae pv. oryzae strain PXO339 , which is the standard representative of the Philippines race 9a. The full-length gene spans 2118 bp and encodes a protein of 705 amino acids. BLAST search in NCBI indicated that the gene belongs to avrBs3 gene family, and designated arp3 (AvrBs3-related protein 3, arp3). The central region of the arp3 contains only 5.5 copies of 102 bp repeats, the smallest copy number of repeats found in avrBs3 gene family by now. Together with the repeats is heptad repeats, resembling leucine zippers. Three functional nuclear localization signals and an acidic activation domain are also found in the C-terminal region. However, the arp3 lacks of two segments in its N-terminal region, which is unique in avrBs3 gene family. Southern blotting data showed that the arp3 is present as a single-copy in genomic DNA of PXO339 and locus in plasmid clone. The arp3 could be expressed in vitro in Escherichia coli BL21 and a 128 kDa fusion protein was detected by Western analysis.
- 相关文献
作者其他论文 更多>>
-
Cytoplasm and cytoplasm-nucleus interactions affect agronomic traits in japonica rice
作者:Tao, DY;Hu, FY;Yang, JY;Yang, GF;Yang, YQ;Xu, P;Li, J;Ye, CR;Dai, LY
关键词:cytoplasm;cytoplasm-nucleus interaction;japonica;Oryza sativa L.
-
Identification of quantitative trait loci controlling cold tolerance at the reproductive stage in Yunnan landrace of rice, Kunmingxiaobaigu
作者:Dai, LY;Lin, XH;Ye, CR;Ise, KZ;Saito, K;Kato, A;Xu, FR;Yu, TQ;Zhang, DP
关键词:Oryza sativa l;Cold tolerance;Kunmingxiaobaigu;Quantitative trait;Oryza-sativa l;Booting stage;Cool tolerance;Molecular map;Linkage;map;Polymorphism;Population;Varieties;Location;Hokkaido
-
Some characteristics of cool weather-tolerant rice varieties in Yunnan Province, China
作者:Tanno, H;Xiong, JH;Dai, LY;Ye, CR
关键词:rice;cold resistance;anthers;cereals;Oryza sativa;Oryza;China;Yunnan