Assembly and comparative genome analysis of four mitochondrial genomes from Saccharum complex species

Li, Sicheng; Yang, Cuifang; Zhang, Gemin; Huang, Yuxin; Zhang, Baoqing; Zhou, Shan; Gao, Yijing; Zong, Wenyi; Duan, Weixing; Li, Sicheng; Wang, Zhen; Yang, Xiping; Wang, Zhen; Yang, Xiping; Xu, Chaohua; SCI

机构： Guangxi Acad Agr Sci, Guangxi Key Lab Sugarcane Genet Improvement, Key Lab Sugarcane Biotechnol & Genet Improvement G, Sugarcane Res Inst,Minist Agr & Rural Affairs, Nanning, Peoples R China; Guangxi Univ, State Key Lab Conservat & Utilizat Subtrop Agro Bi, Nanning, Peoples R China; Guangxi Univ, Guangxi Key Lab Sugarcane Biol, Nanning, Peoples R China; Yunnan Acad Agr Sci, Sugarcane Res Inst, Natl Key Lab Biol Breeding Trop Crops, Kunming, Peoples R China;

关键词： mitochondrial genome; phylogenetic; Saccharinae; Tripidium arundinaceum; Erianthus rockii; Miscanthus sinensis; Narenga porphyrocoma

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Development of a rapid and efficient system for CR genes identification based on hairy root transformation in Brassicaceae

Yu, Wenlin; Yang, Lu; Xiang, Yuanyuan; Zhou, Xueqing; Gan, Longcai; Xiang, Xianyu; Chen, Peng; Zhang, Chunyu; Yu, Wenlin; Yang, Lu; Xiang, Yuanyuan; Zhou, Xueqing; Gan, Longcai; Xiang, Xianyu; Chen, Peng; Zhang, Chunyu; Chen, Yinhua; Li, Rongde; Zhang, Yunyun; Yuan, Lei; Luo, Yanqing; Li, Genze; Wang, Youning; SCI

机构： Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Hubei, Peoples R China; Huazhong Agr Univ, Coll Plant Sci & Technol, Wuhan 430070, Hubei, Peoples R China; Hainan Univ, Sanya Nanfan Res Inst, Natl Key Lab Trop Crop Breeding, Sanya 572025, Hainan, Peoples R China; Natl Agrotech Extens & Serv Ctr, Beijing 100125, Peoples R China; Yunnan Acad Agr Sci, Ind Crops Res Inst, Kunming 650221, Yunnan, Peoples R China; Northwest A&F Univ, Coll Agron, Yangling 712100, Shaanxi, Peoples R China;

关键词： Brassicaceae; Agrobacterium rhizogenes; Hairy root transformation; Clubroot; Gene function

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Applications of chemical fingerprints and machine learning in plant ecology: Recent progress and future perspectives

Zhong, Chen; Wang, Yuan-Zhong; Zhong, Chen; Li, Li; SCI

机构： Med Plants Res Inst, Yunnan Acad Agr Sci, Kunming 650200, Peoples R China; Jishou Univ, Coll Biol Resources & Environm Sci Hunan Prov, Jishou 416000, Peoples R China;

关键词： Chemical fingerprints; Chemometrics; Plant ecology; Analytical techniques; Machine learning algorithms

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Transcriptome and metabolome profiling provides insight into the regulatory network of fruit coloration in Coffea arabica L

Hu, Faguang; Fu, Xingfei; Li, Yanan; Li, Guiping; Yang, Yang; Liu, Dexin; Luo, Xinping; Bi, Xiaofei; Shi, Rui; Dong, Wenjiang; SCI

机构： Yunnan Acad Agr Sci, Inst Trop & Subtrop Cash Crops, Baoshan 678000, Yunnan, Peoples R China; Southwest Forestry Univ, Kunming 650224, Yunnan, Peoples R China; Chinese Acad Trop Agr Sci, Spice & Beverage Res Inst, Wanning 571533, Hainan, Peoples R China;

关键词： Fruit coloration; Ripening stage; Transcriptome; Metabolome; Anthocyanin; Carotenoid

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A Systematic Analysis of the Correlation between Flavor Active Differential Metabolites and Multiple Bean Ripening Stages of Coffea arabica L.

Bi, Xiaofei; Yu, Haohao; Hu, Faguang; Fu, Xingfei; Li, Yanan; Li, Yaqi; Yang, Yang; Liu, Dexin; Li, Guiping; Shi, Rui; Dong, Wenjiang; SCI

机构： Yunnan Acad Agr Sci, Inst Trop & Subtrop Cash Crops, Baoshan 678000, Peoples R China; Southwest Forestry Univ, Key Lab Forest Resources Conservat & Utilizat Sout, Minist Educ, Kunming 650224, Peoples R China; Chinese Acad Trop Agr Sci, Spice & Beverage Res Inst, Wanning 571533, Peoples R China;

关键词： green coffee beans; UPLC-MS/MS; maturity; flavor; differential metabolites

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An integrated QTL mapping and transcriptome sequencing provides further molecular insights and candidate genes for stem strength in rapeseed (Brassica napus L.)

Tian, Zhengshu; Wang, Xinfa; Dun, Xiaoling; Wang, Hanzhong; Ren, Lijun; Tian, Zhengshu; Zhao, Kaiqin; Wang, Xinfa; Wang, Hanzhong; Ren, Lijun; SCI

机构： Chinese Acad Agr Sci, Oil Crops Res Inst, Wuhan, Peoples R China; Yunnan Acad Agr Sci, Ind Crops Inst, Kunming, Peoples R China; Hubei Hongshan Lab, Wuhan, Peoples R China; Shandong Agr Univ, Coll Hort Sci & Engn, Tai An, Peoples R China;

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Establishment of Artificial Rapid Propagation System of Fritillaria crassicaulis

Wang, Yijun; Sun, Ying; Yan, Hongmei; Huang, Hengyu; Wang, Yijun; Yan, Hongmei; SCI

机构： Yunnan Univ Chinese Med, Yunnan Breeding & Cultivat Res & Dev Ctr Endangere, Kunming 650500, Peoples R China; Huazhong Agr Univ, Coll Plant Sci & Technol, Wuhan 430070, Peoples R China; Yunnan Acad Agr Sci, Inst Qual Stand & Testing Technol, Kunming 650205, Peoples R China;

关键词： bulblet; callus; Fritillaria crassicaulis S. C. Chen; in vitro rapid propagation; protuberance; scale

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The Mitogenomic Characterization and Phylogenetic Analysis of the Plant Pathogen Phyllosticta yuccae

Xu, Hui; Zhu, Ziyi; Wei, Cuiyuan; Deng, Gang; Xu, Hui; Zhu, Ziyi; Tian, Zeyuan; Wei, Cuiyuan; Fan, Qi; Wang, Yuanbing; Ding, Mingliang; Xu, Hui; Zhu, Ziyi; Tian, Zeyuan; Wei, Cuiyuan; Fan, Qi; Wang, Yuanbing; Ding, Mingliang; Tian, Zeyuan; Fan, Qi; Shen, Shikang; Ding, Mingliang; Ding, Mingliang; SCI

机构： Yunnan Univ, Sch Agr, Kunming 650091, Peoples R China; Chinese Acad Sci, Kunming Inst Bot, Yunnan Key Lab Fungal Divers & Green Dev, Kunming 650201, Peoples R China; Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Peoples R China; Guangxi Univ, Coll Life Sci & Technol, Nanning 530004, Peoples R China; Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Peoples R China; Yunnan Acad Agr Sci, Food Crops Res Inst, Kunming 650200, Peoples R China; China Agr Univ, Coll Plant Protect, Dept Plant Pathol, Beijing 100083, Peoples R China;

关键词： Phyllosticta yuccae; mitochondrial genome; phylogenetic analysis

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ATR-FTIR and NIR spectra combined with chemometrics and convolutional neural networks for identification of polygonati rhizome

Zhang, Jiao; Zhang, Jinyu; Zhong, Zitao; SCI

机构： Yunnan Prov Acad Sci & Technol, Biomed Ctr, Kunming 650200, Peoples R China; Yunnan Acad Agr Sci, Med Plants Res Inst, Kunming 650200, Peoples R China; Kunming Univ Sci & Technol, Fac Life Sci & Technol, Kunming 650500, Yunnan, Peoples R China;

关键词： Polygonati rhizome; Ethnic usage; ATR-FTIR spectra; Near-infrared spectra; Data fusion; CNN

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Genetic Engineering for Enhancing Sugarcane Tolerance to Biotic and Abiotic Stresses

Kumar, Tanweer; Xu, Chao-Hua; Lu, Xin; Mao, Jun; Lin, Xiu-Qin; Kong, Chun-Yan; Li, Chun-Jia; Li, Xu-Juan; Tian, Chun-Yan; Ebid, Mahmoud H. M.; Liu, Xin-Long; Liu, Hong-Bo; Kumar, Tanweer; Wang, Jun-Gang; Ebid, Mahmoud H. M.; SCI

机构： Yunnan Acad Agr Sci, Sugarcane Res Inst, Natl Key Lab Trop Crop Breeding, Yunnan Key Lab Sugarcane Genet Improvement, Kaiyuan 661699, Peoples R China; Sugar Crops Res Inst, Agr Fisheries & Cooperat Dept, Charsadda Rd, Mardan 23210, Khyber Pakhtunk, Pakistan; Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Natl Key Lab Trop Crop Breeding, Sanya 572024, Peoples R China; Agr Res Ctr, Sugar Crops Res Inst, Giza 12619, Egypt;

关键词： sugarcane; biotic and abiotic stress; genetic engineering; transgenic sugarcane; genome editing

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